poca-SMLM.github.io

If you use PoCA in any capacity, please cite SR-Tesseler and Coloc-Tesseler as they were critical in the development of PoCA:

• Florian Levet, Eric Hosy, Adel Kechkar, Corey Butler, Anne Beghin, Daniel Choquet, Jean-Baptiste Sibarita. SR-Tesseler: a method to segment and quantify localization-based super-resolution microscopy data. Nature Methods 12 (11), 1065-71 (2015) doi:10.1038/nmeth.3579

• Florian Levet, Guillaume Julien, Rémi Galland, Corey Butler, Anne Beghin, Anaël Chazeau, Philipp Hoess, Jonas Ries, Grégory Giannone, Jean-Baptiste Sibarita. A tessellation-based colocalization analysis approach for single-molecule localization microscopy. Nature Communications 10, 2379 (2019) doi:10.1038/s41467-019-10007-4

If you use DBSCAN, please cite additionally:

• Martin Ester, Hans-Peter Kriegel, Jiirg Sander, Xiaowei Xu. A Density-Based Algorithm for Discovering Clusters in Large Spatial Databases with Noise. Proc. of KDD-96 (1996).

If you use Ripley’s functions, please cite additionally:

• Brian D. Ripley. Modelling spatial patterns (with discussion). Journal of the Royal Statistical Society, Series B, Royal Statistical Society,‎ (1977).

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